3WQC
D-threo-3-hydroxyaspartate dehydratase from Delftia sp. HT23
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | D-ser_dehydrat | e3wqcB2 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Alanine racemase-C | F: D-ser_dehydrat | ECOD (1.6) |
B | Ala_racemase_N | e3wqcB1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: Ala_racemase_N | ECOD (1.6) |
A | D-ser_dehydrat | e3wqcA2 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Alanine racemase-C | F: D-ser_dehydrat | ECOD (1.6) |
A | Ala_racemase_N | e3wqcA1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: Ala_racemase_N | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B | 2.40.37.20 | Mainly Beta | Beta Barrel | Lyase, Ornithine Decarboxylase | Chain A, domain 1 | CATH (4.3.0) |
B | 3.20.20.10 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Alanine racemase | CATH (4.3.0) |
A | 2.40.37.20 | Mainly Beta | Beta Barrel | Lyase, Ornithine Decarboxylase | Chain A, domain 1 | CATH (4.3.0) |
A | 3.20.20.10 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Alanine racemase | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF14031 | Putative serine dehydratase domain (D-ser_dehydrat) | Putative serine dehydratase domain | This domain is found at the C-terminus of yeast D-serine dehydratase [1]. Structures have been solved for two bacterial members of this family. The yeast protein has been shown to be a zinc dependant enzyme. | Domain | |
PF01168 | Alanine racemase, N-terminal domain (Ala_racemase_N) | Alanine racemase, N-terminal domain | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR029066 | PLP-binding barrel | Homologous Superfamily | |
IPR042208 | D-serine dehydratase-like domain superfamily | Homologous Superfamily | |
IPR026956 | D-serine dehydratase-like domain | Domain | |
IPR051466 | D-amino acid metabolism enzyme | Family | |
IPR001608 | Alanine racemase, N-terminal | Domain |