4V4P

Crystal structure of 70S ribosome with thrS operator and tRNAs.


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
C [auth AC]SCOP2B SuperfamilyRibosomal protein L1p/L10e-like 8037625 3001911 SCOP2B (2022-06-29)
S [auth AS]SCOP2B SuperfamilyRibosomal protein L22 8033220 3001078 SCOP2B (2022-06-29)
Y [auth A0]SCOP2B SuperfamilyProkaryotic ribosomal protein L17 8032744 3000995 SCOP2B (2022-06-29)
MA [auth BE]SCOP2B SuperfamilySIS domain/Ribosomal protein S2-like 8044010 3001397 SCOP2B (2022-06-29)
PA [auth BH]SCOP2B SuperfamilydsRNA-binding domain-like 8044017 3000985 SCOP2B (2022-06-29)
PA [auth BH]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8044015 3000100 SCOP2B (2022-06-29)
RA [auth BJ]SCOP2B SuperfamilyRibosomal protein S7 8033523 3000799 SCOP2B (2022-06-29)
TA [auth BL]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8037678 3000100 SCOP2B (2022-06-29)
UA [auth BM]SCOP2B SuperfamilyRibosomal protein S10 8044019 3001336 SCOP2B (2022-06-29)
VA [auth BN]SCOP2B SuperfamilyTranslational machinery components 8044020 3000571 SCOP2B (2022-06-29)
WA [auth BO]SCOP2B SuperfamilyNucleic acid-binding proteins 8044021 3000135 SCOP2B (2022-06-29)
XA [auth BP]SCOP2B SuperfamilyS13-like H2TH domain 8003708 3000053 SCOP2B (2022-06-29)
AB [auth BS]SCOP2B SuperfamilyRibosomal protein S16 8044025 3000680 SCOP2B (2022-06-29)
DB [auth BV]SCOP2B SuperfamilyRibosomal protein S19 8044027 3000686 SCOP2B (2022-06-29)
EB [auth BW]SCOP2B SuperfamilyRibosomal protein S20 8044029 3001362 SCOP2B (2022-06-29)
NA [auth BF]SCOP2B SuperfamilyRibosomal protein S3 C-terminal domain 8044012 3001053 SCOP2B (2022-06-29)
NA [auth BF]SCOP2B SuperfamilyProkaryotic type KH domain (KH-domain type II) 8044011 3001043 SCOP2B (2022-06-29)
OA [auth BG]SCOP2B SuperfamilyAlpha-L RNA-binding motif 8044014 3001473 SCOP2B (2022-06-29)
CB [auth BU]SCOP2B SuperfamilyRibosomal protein S18 8044028 3001191 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
C [auth AC]Ribosomal_L1_2nd_1e4v4pAC2 A: a+b two layersX: a+b domain in Ribosomal protein L1 (From Topology)H: a+b domain in Ribosomal protein L1 (From Topology)T: a+b domain in Ribosomal protein L1F: Ribosomal_L1_2nd_1ECOD (1.6)
C [auth AC]Ribosomal_L1_1ste4v4pAC1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Rossmann-like domain in Ribosomal protein L1 (From Topology)T: Rossmann-like domain in Ribosomal protein L1F: Ribosomal_L1_1stECOD (1.6)
E [auth AE]Ribosomal_L3e4v4pAE1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L3ECOD (1.6)
F [auth AF]Ribosomal_L4e4v4pAF1 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: Ribosomal_L4ECOD (1.6)
H [auth AH]Ribosomal_L6e4v4pAH2 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6ECOD (1.6)
H [auth AH]Ribosomal_L6_1e4v4pAH1 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6_1ECOD (1.6)
N [auth AN]Ribosomal_L14e4v4pAN1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_L14ECOD (1.6)
P [auth AP]Ribosomal_L16e4v4pAP1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: Ribosomal_L16ECOD (1.6)
Q [auth AQ]Ribosomal_L5ee4v4pAQ1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_L5eECOD (1.6)
S [auth AS]Ribosomal_L22e4v4pAS1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: Ribosomal_L22ECOD (1.6)
T [auth AT]Ribosomal_L23_1e4v4pAT1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L23_1ECOD (1.6)
U [auth AU]Ribosomal_L26e4v4pAU1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L26ECOD (1.6)
Y [auth A0]Ribosomal_L17_1e4v4pA01 A: a+b two layersX: Enolase-N/ribosomal proteinH: Prokaryotic ribosomal protein L17 (From Topology)T: Prokaryotic ribosomal protein L17F: Ribosomal_L17_1ECOD (1.6)
Z [auth A1]Ribosomal_L20e4v4pA11 A: alpha arraysX: PABP domain-likeH: Ribosomal protein L20 (From Topology)T: Ribosomal protein L20F: Ribosomal_L20ECOD (1.6)
AA [auth A2]Ribosomal_L21pe4v4pA21 A: beta barrelsX: Ribosomal protein L21p (From Topology)H: Ribosomal protein L21p (From Topology)T: Ribosomal protein L21pF: Ribosomal_L21pECOD (1.6)
MA [auth BE]Ribosomal_S2e4v4pBE1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: Ribosomal_S2ECOD (1.6)
PA [auth BH]Ribosomal_S5_Ce4v4pBH1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S5_CECOD (1.6)
PA [auth BH]Ribosomal_S5e4v4pBH2 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: Ribosomal_S5ECOD (1.6)
QA [auth BI]Ribosomal_S6e4v4pBI1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S6 (From Topology)T: Ribosomal protein S6F: Ribosomal_S6ECOD (1.6)
RA [auth BJ]Ribosomal_S7_1e4v4pBJ1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: Ribosomal_S7_1ECOD (1.6)
SA [auth BK]Ribosomal_S8_Ne4v4pBK1 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: Ribosomal_S8_NECOD (1.6)
SA [auth BK]Ribosomal_S8_Ce4v4pBK2 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: Ribosomal_S8_CECOD (1.6)
TA [auth BL]Ribosomal_S9e4v4pBL1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S9ECOD (1.6)
UA [auth BM]Ribosomal_S10e4v4pBM1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: Ribosomal_S10ECOD (1.6)
VA [auth BN]Ribosomal_S11e4v4pBN1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_S11ECOD (1.6)
WA [auth BO]Ribosom_S12_S23e4v4pBO1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosom_S12_S23ECOD (1.6)
XA [auth BP]Ribosomal_S13_1e4v4pBP1 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: Ribosomal_S13_1ECOD (1.6)
YA [auth BQ]Ribosomal_S14e4v4pBQ1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S14ECOD (1.6)
ZA [auth BR]Ribosomal_S15_1e4v4pBR1 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: Ribosomal_S15_1ECOD (1.6)
AB [auth BS]Ribosomal_S16_1e4v4pBS1 A: a+b two layersX: Ribosomal protein S16 (From Topology)H: Ribosomal protein S16 (From Topology)T: Ribosomal protein S16F: Ribosomal_S16_1ECOD (1.6)
DB [auth BV]Ribosomal_S19e4v4pBV1 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: Ribosomal_S19ECOD (1.6)
EB [auth BW]Ribosomal_S20pe4v4pBW1 A: alpha bundlesX: Spectrin repeat-likeH: Ribosomal protein S20 (From Topology)T: Ribosomal protein S20F: Ribosomal_S20pECOD (1.6)
K [auth AK]Ribosomal_L9_Ne4v4pAK2 A: a+b two layersX: L9 N-domain-likeH: L9 N-domain-like (From Topology)T: L9 N-domain-likeF: Ribosomal_L9_NECOD (1.6)
K [auth AK]Ribosomal_L9_Ce4v4pAK1 A: a+b two layersX: Ribosomal protein L9 C-domain (From Topology)H: Ribosomal protein L9 C-domain (From Topology)T: Ribosomal protein L9 C-domainF: Ribosomal_L9_CECOD (1.6)
L [auth AL]Ribosomal_L11e4v4pAL1 A: alpha arraysX: HTHH: HTHT: Ribosomal protein L11, C-terminal domainF: Ribosomal_L11ECOD (1.6)
L [auth AL]Ribosomal_L11_Ne4v4pAL2 A: a+b two layersX: Ribosomal protein L11/L12e N-terminal domain-likeH: Ribosomal protein L11/L12e N-terminal domain (From Topology)T: Ribosomal protein L11/L12e N-terminal domainF: Ribosomal_L11_NECOD (1.6)
M [auth AM]Ribosomal_L13e4v4pAM1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: Ribosomal_L13ECOD (1.6)
O [auth AO]Ribosomal_L18e4v4pAO1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L18ECOD (1.6)
R [auth AR]Ribosomal_L24ee4v4pAR1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_L24eECOD (1.6)
V [auth AV]Ribosomal_L25pe4v4pAV2 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: Ribosomal_L25pECOD (1.6)
V [auth AV]Ribosomal_TL5_C_1e4v4pAV1 A: a+b complex topologyX: Ribosomal protein TL5/L25 C-terminal domain-likeH: Ribosomal protein TL5/L25 C-terminal domain-related (From Topology)T: Ribosomal protein TL5/L25 C-terminal domain-relatedF: Ribosomal_TL5_C_1ECOD (1.6)
W [auth AW]Ribosomal_L29e4v4pAW1 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: Ribosomal_L29ECOD (1.6)
X [auth AX]Ribosomal_L30e4v4pAX1 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: Ribosomal_L30ECOD (1.6)
BA [auth A3]Ribosomal_L27e4v4pA31 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal L27 proteinF: Ribosomal_L27ECOD (1.6)
CA [auth A4]Ribosomal_L31e4v4pA41 A: few secondary structure elementsX: Ribosomal protein L31p (From Topology)H: Ribosomal protein L31p (From Topology)T: Ribosomal protein L31pF: Ribosomal_L31ECOD (1.6)
DA [auth A5]Ribosomal_L32pe4v4pA51 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L32pECOD (1.6)
EA [auth A6]Ribosomal_L33e4v4pA61 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L33ECOD (1.6)
FA [auth A7]Ribosomal_L34e4v4pA71 A: extended segmentsX: 50S ribosomal protein L34 (From Topology)H: 50S ribosomal protein L34 (From Topology)T: 50S ribosomal protein L34F: Ribosomal_L34ECOD (1.6)
GA [auth A8]Ribosomal_L35pe4v4pA81 A: a+b two layersX: Ribosomal protein L35p (From Topology)H: Ribosomal protein L35p (From Topology)T: Ribosomal protein L35pF: Ribosomal_L35pECOD (1.6)
HA [auth A9]Ribosomal_L36e4v4pA91 A: few secondary structure elementsX: Ribosomal protein L36 (From Topology)H: Ribosomal protein L36 (From Topology)T: Ribosomal protein L36F: Ribosomal_L36ECOD (1.6)
NA [auth BF]Ribosomal_S3_Ce4v4pBF1 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: Ribosomal_S3_CECOD (1.6)
NA [auth BF]KH_2_1e4v4pBF2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: KH_2_1ECOD (1.6)
OA [auth BG]S4e4v4pBG1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: S4ECOD (1.6)
D [auth AD]Ribosomal_L2_1e4v4pAD1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_L2_1ECOD (1.6)
D [auth AD]Ribosomal_L2_C_2e4v4pAD2 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L2_C_2ECOD (1.6)
BB [auth BT]Ribosomal_S17_1e4v4pBT1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S17_1ECOD (1.6)
CB [auth BU]Ribosomal_S18e4v4pBU1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: Ribosomal_S18ECOD (1.6)
G [auth AG]Ribosomal_L5_Ce4v4pAG1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: Ribosomal_L5_CECOD (1.6)
I [auth AI]Ribosomal_L12_Ne4v4pAI1 A: alpha duplicates or obligate multimersX: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology)H: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology)T: Ribosomal protein L7/12, oligomerisation (N-terminal) domainF: Ribosomal_L12_NECOD (1.6)
I [auth AI]Ribosomal_L12e4v4pAI2 A: a+b two layersX: ClpS-likeH: ClpS-related (From Topology)T: ClpS-relatedF: Ribosomal_L12ECOD (1.6)
J [auth AJ]Ribosomal_L12_Ne4v4pAJ1 A: alpha duplicates or obligate multimersX: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology)H: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology)T: Ribosomal protein L7/12, oligomerisation (N-terminal) domainF: Ribosomal_L12_NECOD (1.6)
J [auth AJ]Ribosomal_L12e4v4pAJ2 A: a+b two layersX: ClpS-likeH: ClpS-related (From Topology)T: ClpS-relatedF: Ribosomal_L12ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
C [auth AC]PF00687Ribosomal protein L1p/L10e family (Ribosomal_L1)Ribosomal protein L1p/L10e familyThis family includes prokaryotic L1 and eukaryotic L10.Domain
S [auth AS]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.Domain
Y [auth A0]PF01196Ribosomal protein L17 (Ribosomal_L17)Ribosomal protein L17- Family
MA [auth BE]PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
PA [auth BH]PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domain- Domain
PA [auth BH]PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domain- Domain
QA [auth BI]PF01250Ribosomal protein S6 (Ribosomal_S6)Ribosomal protein S6- Domain
TA [auth BL]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
UA [auth BM]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes.Domain
VA [auth BN]PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
WA [auth BO]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23- Family
XA [auth BP]PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
ZA [auth BR]PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15- Domain
AB [auth BS]PF00886Ribosomal protein S16 (Ribosomal_S16)Ribosomal protein S16- Family
DB [auth BV]PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19- Domain
X [auth AX]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7.Domain
NA [auth BF]PF07650KH domain (KH_2)KH domain- Domain
NA [auth BF]PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer.Domain
OA [auth BG]PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
OA [auth BG]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
D [auth AD]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domain- Domain
D [auth AD]PF00181Ribosomal Proteins L2, RNA binding domain (Ribosomal_L2)Ribosomal Proteins L2, RNA binding domain- Domain
CB [auth BU]PF01084Ribosomal protein S18 (Ribosomal_S18)Ribosomal protein S18- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth AB]5S ribosomal RNA---
B [auth AA]23S ribosomal RNA---
C [auth AC]50S ribosomal protein L1
E [auth AE]50S ribosomal protein L3---
F [auth AF]50S ribosomal protein L4---
H [auth AH]50S ribosomal protein L6---
N [auth AN]50S ribosomal protein L14---
P [auth AP]50S ribosomal protein L16---
Q [auth AQ]50S ribosomal protein L18---
S [auth AS]50S ribosomal protein L22
T [auth AT]50S ribosomal protein L23---
U [auth AU]50S ribosomal protein L24---
Y [auth A0]50S ribosomal protein L17
Z [auth A1]50S ribosomal protein L20---
AA [auth A2]50S ribosomal protein L21---
IA [auth BA]16S rRNA---
MA [auth BE]30S ribosomal protein S2
PA [auth BH]30S ribosomal protein S5
QA [auth BI]30S ribosomal protein S6
RA [auth BJ]30S ribosomal protein S7
SA [auth BK]30S ribosomal protein S8---
TA [auth BL]30S ribosomal protein S9
UA [auth BM]30S ribosomal protein S10
VA [auth BN]30S ribosomal protein S11
WA [auth BO]30S ribosomal protein S12
XA [auth BP]30S ribosomal protein S13
YA [auth BQ]30S ribosomal protein S14---
ZA [auth BR]30S ribosomal protein S15
AB [auth BS]30S ribosomal protein S16
DB [auth BV]30S ribosomal protein S19
EB [auth BW]30S ribosomal protein S20
K [auth AK]50S ribosomal protein L9---
L [auth AL]50S ribosomal protein L11---
M [auth AM]50S ribosomal protein L13---
O [auth AO]50S ribosomal protein L15---
R [auth AR]50S ribosomal protein L19---
V [auth AV]50S general stress protein CTC (L25)---
W [auth AW]50S ribosomal protein L29---
X [auth AX]50S ribosomal protein L30
BA [auth A3]50S ribosomal protein L27---
CA [auth A4]50S ribosomal protein L31---
DA [auth A5]50S ribosomal protein L32---
EA [auth A6]50S ribosomal protein L33---
FA [auth A7]50S ribosomal protein L34---
GA [auth A8]50S ribosomal protein L35---
HA [auth A9]50S ribosomal protein L36---
JA [auth BB],
KA [auth BC]
tRNA Phe (unmodified bases)---
LA [auth B1]thrS mRNA operator---
NA [auth BF]30S ribosomal protein S3
OA [auth BG]30S ribosomal protein S4
D [auth AD]50S ribosomal protein L2
BB [auth BT]30S ribosomal protein S17---
CB [auth BU]30S ribosomal protein S18
FB [auth BX]30S ribosomal protein Thx -
G [auth AG]50S ribosomal protein L5---
I [auth AI],
J [auth AJ]
50S ribosomal protein L7/L12---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
C [auth AC]IPR023673Large ribosomal subunit protein uL1, conserved siteConserved Site
C [auth AC]IPR016095Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domainHomologous Superfamily
C [auth AC]IPR005878Large ribosomal subunit protein uL1, bacterial-typeFamily
C [auth AC]IPR023674Ribosomal protein uL1-likeHomologous Superfamily
C [auth AC]IPR002143Large ribosomal subunit protein uL1Family
C [auth AC]IPR028364Ribosomal protein uL1/ribosomal biogenesis proteinFamily
S [auth AS]IPR047867Large ribosomal subunit protein uL22, bacterial/organelle-typeFamily
S [auth AS]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
S [auth AS]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
S [auth AS]IPR001063Large ribosomal subunit protein uL22Family
S [auth AS]IPR005727Large ribosomal subunit protein uL22, bacterial/chloroplast-typeFamily
Y [auth A0]IPR036373Large ribosomal subunit protein bL17 superfamilyHomologous Superfamily
Y [auth A0]IPR000456Large ribosomal subunit protein bL17Family
MA [auth BE]IPR005706Small ribosomal subunit protein uS2, bacteria/mitochondria/plastidFamily
MA [auth BE]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
MA [auth BE]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
MA [auth BE]IPR001865Small ribosomal subunit protein uS2Family
PA [auth BH]IPR000851Small ribosomal subunit protein uS5Family
PA [auth BH]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
PA [auth BH]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
PA [auth BH]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
PA [auth BH]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
PA [auth BH]IPR005712Small ribosomal subunit protein uS5, bacterial-typeFamily
PA [auth BH]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
QA [auth BI]IPR020815Small ribosomal subunit protein bS6, conserved siteConserved Site
QA [auth BI]IPR000529Small ribosomal subunit protein bS6Family
QA [auth BI]IPR020814Small ribosomal subunit protein bS6, plastid/chloroplastFamily
QA [auth BI]IPR035980Small ribosomal subunit protein bS6 superfamilyHomologous Superfamily
QA [auth BI]IPR014717Translation elongation factor EF1B/small ribosomal subunit protein bS6Homologous Superfamily
RA [auth BJ]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
RA [auth BJ]IPR000235Small ribosomal subunit protein uS7Family
RA [auth BJ]IPR005717Small ribosomal subunit protein uS7, bacterial/organellar-typeFamily
RA [auth BJ]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
RA [auth BJ]IPR023798Small ribosomal subunit protein uS7 domainDomain
TA [auth BL]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
TA [auth BL]IPR023035Small ribosomal subunit protein uS9, bacterial/plastidFamily
TA [auth BL]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
TA [auth BL]IPR000754Small ribosomal subunit protein uS9Family
TA [auth BL]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
UA [auth BM]IPR001848Small ribosomal subunit protein uS10Family
UA [auth BM]IPR027486Small ribosomal subunit protein uS10 domainDomain
UA [auth BM]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
UA [auth BM]IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
VA [auth BN]IPR001971Small ribosomal subunit protein uS11Family
VA [auth BN]IPR019981Small ribosomal subunit protein uS11, bacterial-typeFamily
VA [auth BN]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
VA [auth BN]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
WA [auth BO]IPR006032Small ribosomal subunit protein uS12Family
WA [auth BO]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
WA [auth BO]IPR005679Ribosomal protein uS12, bacterial-typeFamily
XA [auth BP]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
XA [auth BP]IPR001892Small ribosomal subunit protein uS13Family
XA [auth BP]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
XA [auth BP]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
XA [auth BP]IPR019980Small ribosomal subunit protein uS13, bacterial-typeFamily
ZA [auth BR]IPR005290Small ribosomal subunit protein uS15, bacterial-typeFamily
ZA [auth BR]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
ZA [auth BR]IPR000589Small ribosomal subunit protein uS15Family
AB [auth BS]IPR023803Small ribosomal subunit protein bS16 domain superfamilyHomologous Superfamily
AB [auth BS]IPR000307Small ribosomal subunit protein bS16Family
DB [auth BV]IPR002222Small ribosomal subunit protein uS19Family
DB [auth BV]IPR005732Small ribosomal subunit protein uS19, bacterial-typeFamily
DB [auth BV]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
DB [auth BV]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
EB [auth BW]IPR036510Small ribosomal subunit protein bS20 superfamilyHomologous Superfamily
EB [auth BW]IPR002583Small ribosomal subunit protein bS20Family
X [auth AX]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
X [auth AX]IPR005996Large ribosomal subunit protein uL30, bacterial-typeFamily
X [auth AX]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
X [auth AX]IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
NA [auth BF]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
NA [auth BF]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
NA [auth BF]IPR004087K Homology domainDomain
NA [auth BF]IPR004044K Homology domain, type 2Domain
NA [auth BF]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
NA [auth BF]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
NA [auth BF]IPR005704Small ribosomal subunit protein uS3, bacterial-typeFamily
NA [auth BF]IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
OA [auth BG]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
OA [auth BG]IPR002942RNA-binding S4 domainDomain
OA [auth BG]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
OA [auth BG]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
OA [auth BG]IPR005709Small ribosomal subunit protein uS4, bacterial-typeFamily
OA [auth BG]IPR022801Small ribosomal subunit protein uS4Family
D [auth AD]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
D [auth AD]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
D [auth AD]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
D [auth AD]IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
D [auth AD]IPR005880Large ribosomal subunit protein uL2, bacterial/organellar-typeFamily
D [auth AD]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
D [auth AD]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
D [auth AD]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
D [auth AD]IPR002171Large ribosomal subunit protein uL2Family
CB [auth BU]IPR001648Small ribosomal subunit protein bS18Family
CB [auth BU]IPR018275Small ribosomal subunit protein bS18, conserved siteConserved Site
CB [auth BU]IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
FB [auth BX]IPR030826Small ribosomal subunit protein bTHX/bTHXc/bTHXmFamily
FB [auth BX]IPR031414Small ribosomal subunit protein bTHXFamily