Ligand validation:1P80


HEM: PROTOPORPHYRIN IX CONTAINING FE

HEM is a Ligand Of Interest in 1P80 designated by the RCSB


Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter1P80_HEM_B_760Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter1P80_HEM_B_760Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter1P80_HEM_B_760Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
1P80_HEM_B_760 99% 25% 0.054 0.9891.52 1.51 6 920100%1
1P80_HEM_C_760 99% 30% 0.061 0.9881.49 1.29 4 610100%1
1P80_HEM_D_760 99% 31% 0.063 0.991.47 1.28 5 610100%1
1P80_HEM_A_760 98% 29% 0.063 0.9891.47 1.36 5 610100%1
3P9P_HEM_A_754 100% 11% 0.034 0.9921.98 2.26 8 1720100%0.25
3TTV_HEM_D_760 100% 11% 0.05 0.9911.51 2.66 9 25 10100%1
1GG9_HEM_C_760 99% 17% 0.057 0.9881.94 1.66 5 520100%1
1CF9_HEM_B_754 99% 27% 0.057 0.9851.65 1.3 7 540100%1
3TTT_HEM_C_760 99% 6% 0.063 0.991.97 3.05 14 22 10100%1
1FHF_HEM_A_350 100% 17% 0.021 0.9971.8 1.82 12 340100%1
1HBH_HEM_A_144 100% 11% 0.019 0.9971.48 2.62 5 1250100%1
2D2C_HEM_A_301 100% 9% 0.024 0.9992.2 2.28 9 1240100%1
3EJD_HEM_B_405 100% 17% 0.018 0.9981.9 1.69 6 820100%1
3EJE_HEM_B_405 100% 18% 0.022 0.9971.91 1.6 8 810100%1