Ligand validation:6CSD


HEM: PROTOPORPHYRIN IX CONTAINING FE

HEM is a Ligand Of Interest in 6CSD designated by the RCSB


Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter6CSD_HEM_A_601Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter6CSD_HEM_A_601Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter6CSD_HEM_A_601Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
6CSD_HEM_A_601 80% 23% 0.134 0.9841.59 1.57 8 1010100%1
6CSD_HEM_B_601 68% 27% 0.172 0.9851.54 1.39 6 660100%1
3TBG_HEM_B_800 80% 12% 0.128 0.9762.15 1.91 15 710100%1
4WNV_HEM_D_601 75% 26% 0.15 0.9841.41 1.58 5 1120100%1
6CSB_HEM_B_601 72% 24% 0.16 0.9841.67 1.47 7 610100%1
4WNT_HEM_A_601 71% 24% 0.159 0.981.5 1.59 5 810100%1
3TDA_HEM_D_800 67% 13% 0.171 0.9812.17 1.85 17 1130100%1
1FHF_HEM_A_350 100% 17% 0.021 0.9971.8 1.82 12 340100%1
1HBH_HEM_A_144 100% 11% 0.019 0.9971.48 2.62 5 1250100%1
2D2C_HEM_A_301 100% 9% 0.024 0.9992.2 2.28 9 1240100%1
3EJD_HEM_B_405 100% 17% 0.018 0.9981.9 1.69 6 820100%1
3EJE_HEM_B_405 100% 18% 0.022 0.9971.91 1.6 8 810100%1