Ligand validation:8W84


NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 8W84 designated by the RCSB


Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter8W84_NAG_C_1000Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter8W84_NAG_C_1000Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter8W84_NAG_C_1000Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
8W84_NAG_C_1000 51% 80% 0.112 0.8660.25 0.59 - -40100%0.9333
8W84_NAG_D_2000 38% 53% 0.159 0.860.32 1.45 - 300100%0.9333
4OZF_NAG_A_1000 56% 64% 0.144 0.9160.3 1.07 - 100100%0.9333
5KSA_NAG_A_201 52% 66% 0.085 0.840.31 0.98 - 100100%0.9333
6U3M_NAG_A_1001 44% 79% 0.112 0.8380.42 0.45 - -00100%0.9333
6MFG_NAG_A_1001 44% 78% 0.108 0.8330.35 0.54 - -00100%0.9333
7SG2_NAG_A_201 42% 73% 0.19 0.910.28 0.74 - 100100%0.9333
3H0C_NAG_A_794 100% 56% 0.021 0.9950.61 1.08 - 100100%0.9333
5F9W_NAG_A_510 100% 88% 0.023 0.9940.24 0.43 - -00100%0.9333
5LDS_NAG_B_1007 100% 67% 0.022 0.9950.48 0.79 - -00100%0.9333
5O5D_NAG_A_601 100% 65% 0.022 0.9940.32 0.99 - 100100%0.9333
6MUG_NAG_G_629 100% 76% 0.022 0.9940.35 0.58 - -00100%0.9333