ADP: ADENOSINE-5'-DIPHOSPHATE
ADP is a Ligand Of Interest in 1NMY designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
1NMY_ADP_A_302 | 95% | 37% | 0.07 | 0.972 | 0.98 | 1.47 | 1 | 5 | 0 | 0 | 100% | 0.5 |
1E2G_ADP_A_302 | 94% | 30% | 0.076 | 0.973 | 1.13 | 1.65 | 2 | 6 | 0 | 0 | 100% | 1 |
1NN3_ADP_A_302 | 93% | 37% | 0.077 | 0.972 | 1.02 | 1.43 | 1 | 4 | 0 | 0 | 100% | 1 |
2XX3_ADP_A_302 | 88% | 41% | 0.087 | 0.963 | 1.28 | 1.01 | 4 | 1 | 0 | 0 | 100% | 1 |
1E2D_ADP_A_302 | 87% | 35% | 0.094 | 0.966 | 0.93 | 1.6 | 1 | 6 | 0 | 0 | 100% | 1 |
1NMX_ADP_A_302 | 86% | 37% | 0.091 | 0.96 | 0.8 | 1.67 | - | 5 | 0 | 0 | 100% | 1 |
5GZA_ADP_A_401 | 100% | 2% | 0.019 | 0.997 | 3.36 | 3.39 | 13 | 11 | 1 | 0 | 100% | 1 |
5KHW_ADP_A_1201 | 100% | 41% | 0.023 | 0.995 | 1.1 | 1.2 | 1 | 2 | 0 | 0 | 100% | 1 |
8VZA_ADP_A_603 | 100% | 37% | 0.024 | 0.995 | 0.96 | 1.51 | 1 | 5 | 0 | 0 | 100% | 1 |
3KB1_ADP_A_301 | 100% | 22% | 0.021 | 0.996 | 2.06 | 1.21 | 6 | 4 | 1 | 0 | 100% | 1 |
2QL6_ADP_M_301 | 100% | 38% | 0.029 | 0.996 | 1.08 | 1.33 | 2 | 2 | 0 | 0 | 100% | 1 |