Ligand validation:3E4E


HEM: PROTOPORPHYRIN IX CONTAINING FE

HEM is a Ligand Of Interest in 3E4E designated by the RCSB


Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter3E4E_HEM_B_500Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter3E4E_HEM_B_500Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter3E4E_HEM_B_500Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
3E4E_HEM_B_500 67% 17% 0.14 0.9471.95 1.66 10 1130100%1
3E4E_HEM_A_500 65% 18% 0.151 0.9551.96 1.55 10 11140100%1
3T3Z_HEM_B_500 85% 20% 0.119 0.9841.93 1.44 7 820100%1
3E6I_HEM_A_500 83% 12% 0.118 0.9781.96 2.14 7 1350100%1
3GPH_HEM_B_500 76% 12% 0.136 0.9741.95 2.17 7 1660100%1
3LC4_HEM_A_500 57% 16% 0.2 0.9761.9 1.81 5 1080100%1
3KOH_HEM_A_500 55% 15% 0.214 0.9831.95 1.83 6 10100100%1
1FHF_HEM_A_350 100% 17% 0.021 0.9971.8 1.82 12 340100%1
1HBH_HEM_A_144 100% 11% 0.019 0.9971.48 2.62 5 1250100%1
2D2C_HEM_A_301 100% 9% 0.024 0.9992.2 2.28 9 1240100%1
3EJD_HEM_B_405 100% 17% 0.018 0.9981.9 1.69 6 820100%1
3EJE_HEM_B_405 100% 18% 0.022 0.9971.91 1.6 8 810100%1