Ligand validation:4OPD

GRG: GERANYLGERANYL DIPHOSPHATE

GRG is a Ligand Of Interest in 4OPD designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
4OPD_GRG_B_502	99%	42%	0.047	0.987	0.67	1.57	-	6	2	0	100%	0.9
4OPD_GRG_A_502	99%	42%	0.052	0.981	0.67	1.54	-	7	2	0	100%	0.9
4OPD_GRG_A_503	97%	42%	0.052	0.989	0.88	1.36	-	4	1	0	86%	0.8621
4OPD_GRG_B_503	97%	42%	0.052	0.989	0.88	1.34	-	4	2	0	86%	0.8621
4OPD_GRG_A_504	89%	42%	0.054	0.983	0.73	1.48	-	5	0	0	72%	0.6517
4OPD_GRG_B_504	82%	43%	0.066	0.971	0.76	1.42	-	5	1	0	72%	0.6517
4OPT_GRG_A_502	21%	42%	0.175	0.785	0.7	1.51	-	8	0	0	100%	0.85
4OPI_GRG_A_502	17%	40%	0.216	0.796	0.72	1.61	-	8	1	0	100%	0.8
4OPG_GRG_A_502	17%	42%	0.189	0.762	0.72	1.49	-	8	0	0	100%	0.95
4OPU_GRG_A_503	13%	28%	0.266	0.837	0.7	2.17	-	10	3	0	86%	0.6897
2E8V_GRG_B_1502	86%	26%	0.088	0.957	1.84	1.18	8	5	0	0	100%	1
3PZ2_GRG_B_334	78%	16%	0.138	0.981	2.09	1.65	11	5	2	0	100%	1
1N4S_GRG_J_1505	76%	57%	0.12	0.958	0.77	0.89	-	1	1	0	100%	1
2Z4V_GRG_A_1401	73%	27%	0.141	0.968	1.83	1.14	8	3	1	0	100%	1
2Q80_GRG_A_500	67%	19%	0.153	0.962	1.97	1.48	11	6	2	0	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.