4YDJ
NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose
NAG is a Ligand Of Interest in 4YDJ designated by the RCSB
Best-fitted instance in this entry | |
Other instances in this entry |
Best-fitted instance in this entry | |
Best-fitted PDB instances with same target (top 5) |
Best-fitted instance in this entry | |
Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
---|---|---|---|---|---|---|---|---|---|---|---|---|
4YDJ_NAG_I_505 | 50% | 87% | 0.156 | 0.906 | 0.23 | 0.47 | - | - | 0 | 0 | 100% | 0.9333 |
4YDJ_NAG_G_503 | 45% | 88% | 0.158 | 0.887 | 0.23 | 0.43 | - | - | 0 | 0 | 100% | 0.9333 |
4YDJ_NAG_G_508 | 41% | 90% | 0.172 | 0.888 | 0.22 | 0.38 | - | - | 0 | 0 | 100% | 0.9333 |
4YDJ_NAG_G_505 | 41% | 83% | 0.144 | 0.858 | 0.28 | 0.49 | - | - | 0 | 0 | 100% | 0.9333 |
4YDJ_NAG_G_501 | 28% | 88% | 0.215 | 0.867 | 0.2 | 0.45 | - | - | 0 | 0 | 100% | 0.9333 |
4YDJ_NAG_I_503 | 22% | 89% | 0.243 | 0.861 | 0.23 | 0.41 | - | - | 0 | 0 | 100% | 0.9333 |
4YDJ_NAG_G_506 | 19% | 86% | 0.21 | 0.804 | 0.25 | 0.46 | - | - | 0 | 0 | 100% | 0.9333 |
4YDJ_NAG_I_501 | 13% | 87% | 0.27 | 0.813 | 0.21 | 0.48 | - | - | 0 | 0 | 100% | 0.9333 |
4YDJ_NAG_I_508 | 13% | 86% | 0.273 | 0.814 | 0.26 | 0.46 | - | - | 0 | 0 | 100% | 0.9333 |
4YDJ_NAG_I_504 | 13% | 87% | 0.341 | 0.881 | 0.28 | 0.4 | - | - | 0 | 0 | 100% | 0.9333 |
4YDJ_NAG_H_301 | 11% | 85% | 0.361 | 0.887 | 0.24 | 0.49 | - | - | 0 | 0 | 100% | 0.9333 |
4YDJ_NAG_G_504 | 11% | 88% | 0.277 | 0.795 | 0.25 | 0.42 | - | - | 0 | 0 | 100% | 0.9333 |
4YDJ_NAG_G_507 | 8% | 86% | 0.329 | 0.812 | 0.2 | 0.52 | - | - | 0 | 0 | 100% | 0.9333 |
4YDJ_NAG_I_509 | 7% | 86% | 0.364 | 0.817 | 0.26 | 0.46 | - | - | 0 | 0 | 100% | 0.9333 |
4YDJ_NAG_A_301 | 6% | 86% | 0.342 | 0.767 | 0.19 | 0.51 | - | - | 0 | 0 | 100% | 0.9333 |
4YDJ_NAG_I_507 | 5% | 85% | 0.4 | 0.815 | 0.21 | 0.53 | - | - | 0 | 0 | 100% | 0.9333 |
4YDJ_NAG_G_509 | 5% | 83% | 0.32 | 0.729 | 0.25 | 0.52 | - | - | 0 | 0 | 100% | 0.9333 |
4YDJ_NAG_B_301 | 5% | 88% | 0.349 | 0.747 | 0.27 | 0.4 | - | - | 0 | 0 | 100% | 0.9333 |
4YDJ_NAG_I_502 | 3% | 88% | 0.511 | 0.859 | 0.24 | 0.41 | - | - | 0 | 0 | 100% | 0.9333 |
4YDJ_NAG_I_506 | 3% | 88% | 0.415 | 0.75 | 0.25 | 0.41 | - | - | 0 | 0 | 100% | 0.9333 |
4YDJ_NAG_L_301 | 2% | 87% | 0.483 | 0.741 | 0.23 | 0.47 | - | - | 0 | 0 | 100% | 0.9333 |
4YDJ_NAG_G_502 | 0% | 68% | 0.69 | 0.698 | 0.51 | 0.7 | - | 1 | 1 | 0 | 100% | 0.9333 |
5F9W_NAG_A_510 | 100% | 88% | 0.023 | 0.994 | 0.24 | 0.43 | - | - | 0 | 0 | 100% | 0.9333 |
4YFL_NAG_E_507 | 98% | 70% | 0.061 | 0.985 | 0.48 | 0.66 | - | - | 0 | 0 | 100% | 0.9333 |
3SE8_NAG_G_734 | 94% | 68% | 0.063 | 0.961 | 0.56 | 0.68 | - | - | 0 | 0 | 100% | 0.9333 |
4LSQ_NAG_G_503 | 93% | 57% | 0.065 | 0.96 | 0.58 | 1.07 | - | 1 | 0 | 0 | 100% | 0.9333 |
7SX7_NAG_A_508 | 92% | 71% | 0.073 | 0.964 | 0.28 | 0.84 | - | 1 | 0 | 0 | 100% | 0.9333 |
3H0C_NAG_A_794 | 100% | 56% | 0.021 | 0.995 | 0.61 | 1.08 | - | 1 | 0 | 0 | 100% | 0.9333 |
5LDS_NAG_B_1007 | 100% | 67% | 0.022 | 0.995 | 0.48 | 0.79 | - | - | 0 | 0 | 100% | 0.9333 |
5O5D_NAG_A_601 | 100% | 65% | 0.022 | 0.994 | 0.32 | 0.99 | - | 1 | 0 | 0 | 100% | 0.9333 |
6MUG_NAG_G_629 | 100% | 76% | 0.022 | 0.994 | 0.35 | 0.58 | - | - | 0 | 0 | 100% | 0.9333 |
3GXM_NAG_A_498 | 100% | 45% | 0.026 | 0.992 | 0.75 | 1.34 | - | 2 | 0 | 0 | 100% | 0.9333 |