Ligand validation:5VC0


RIT: RITONAVIR

RIT is a Ligand Of Interest in 5VC0 designated by the RCSB


Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5VC0_RIT_A_602Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5VC0_RIT_A_602Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5VC0_RIT_A_602Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
5VC0_RIT_A_602 11% 9% 0.38 0.9012.51 2.04 11 1150100%1
3NXU_RIT_A_600 55% 1% 0.144 0.9135.85 3.07 34 25 40100%1
5VCE_RIT_A_602 18% 10% 0.282 0.8682.56 1.82 10 9100100%1
3PRS_RIT_A_1001 93% 40% 0.071 0.9670.99 1.32 2 730100%0.979
3NDX_RIT_A_100 69% 24% 0.117 0.9311.06 2.05 4 19 10100%0.91
3NDW_RIT_A_100 57% 27% 0.135 0.9091.01 1.91 3 1400100%0.91
7VE0_RIT_A_401 51% 39% 0.137 0.890.95 1.42 2 700100%1
6XCY_RIT_A_401 47% 22% 0.154 0.8941.16 2.08 3 1210100%1